role of environmental factors in shaping the soil microbiome

CAS Re-evaluation of Gao et al. Soil abiotic variables are more important than Salicaceae phylogeny or habitat specialization in determining soil microbial community structure. Archaea 2015:114. https://doi.org/10.1017/cbo9781107415416, Islam W, Qasim M, Noman A et al (2017) Genetic resistance in chickpea against Ascochyta blight: historical efforts and recent accomplishments. 15 October 2022, Nature Medicine eCollection 2022. https://doi.org/10.1016/B978-012470100-7/50005-4, Hrynkiewicz K, Toljander YK, Baum C et al (2012) Correspondence of ectomycorrhizal diversity and colonisation of willows (Salix spp.) Am J Clin Nutr 90:468476. https://doi.org/10.1016/j.soilbio.2015.01.009, Liu Y, Zhang H, Xiong M et al (2017) Abundance and composition response of wheat field soil bacterial and fungal communities to elevated CO2 and increased air temperature. a, MetaCyc pathways. Accessibility REVIEW ARTICLE Role of environmental factors in shaping the soil microbiome Waqar Islam 1,2,3 & Ali Noman 4 & Hassan Naveed 5 & Zhiqun Huang 1,2 & Han Y. H. Chen 1,2,3 Received: 18 April 2020 / Accepted: 10 August 2020 # Springer-Verlag GmbH Germany, part of Springer Nature 2020 Abstract The soil microbiome comprises one of the most important and complex components of all terrestrial ecosystems as it harbors millions of microbes including bacteria, fungi, archaea, viruses, and protozoa. Gastroenterology 152, 111123.e8 (2017). Environ. https://doi.org/10.1128/AEM.03085-09, Cassman NA, Leite MFA, Pan Y et al (2016) Plant and soil fungal but not soil bacterial communities are linked in long-term fertilized grassland. Together, these microbes and environmental factors contribute to shaping the soil microbiome, both spatially and temporally. 101001678), NWO-VICI grant VI.C.202.022, and the Netherlands Organ-on-Chip Initiative, an NWO Gravitation project (024.003.001) funded by the Ministry of Education, Culture and Science of the government of The Netherlands. ISSN 1476-4687 (online) Proc Natl Acad Sci U S A 108:84208425. Fungal Ecol 10:319. The effect of season and weather on physical activity: a systematic review. https://doi.org/10.1007/978-1-4020-8770-7_1, Siles JA, Margesin R (2016) Abundance and diversity of bacterial, archaeal, and fungal communities along an altitudinal gradient in alpine forest soils: what are the driving factors? https://doi.org/10.1126/science.1203980, Mendes R, Garbeva P, Raaijmakers JM (2013) The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms. https://doi.org/10.1371/journal.pone.0067884, Cortois R, Schrder-Georgi T, Weigelt A et al (2016)Plantsoil feedbacks: role of plant functional group and plant traits. Nat. Google Scholar, Jacoby R, Peukert M, Succurro A et al (2017) The role of soil microorganisms in plant mineral nutritioncurrent knowledge and future directions. https://doi.org/10.1126/science.287.5460.2004, Sena HH, Sanches MA, Rocha DFS et al (2018) Production of biosurfactants by soil fungi isolated from the amazon forest. R.G. To facilitate the re-use of the codes, the repository also includes example datasets that enable users to test the codes without the need to apply for access to phenotypes. Elsevier, Amsterdam, pp 600605. Google Scholar. 11, 116 (2020). Science 287:20042006. Field description Environ Microbiol 13:16421654. Hsieh, T. C., Ma, K. H. & Chao, A. iNEXT: an R package for rarefaction and extrapolation of species diversity (Hill numbers). https://doi.org/10.1016/j.cois.2015.01.009, Williams A, Ptriacq P, Beerling DJ et al (2018) Impacts of atmospheric CO2 and soil nutritional value on plant responses to rhizosphere colonization by soil bacteria. https://doi.org/10.1007/s10327-013-0457-3, Tardif S, Yergeau , Tremblay J et al (2016) The willow microbiome is influenced by soil petroleum-hydrocarbon concentration with plant compartment-specific effects. Gut 65, 5762 (2016). PubMed https://doi.org/10.1016/j.fbr.2012.01.001, Simonin M, Nunan N, Bloor JMG et al (2017)Short-term responses and resistance of soil microbial community structure to elevated CO2 and N addition in grassland mesocosms. It has been long recognized that some of these microbes, such as mycorrhizal fungi or nitrogen fixing symbiotic bacteria, play important roles in plant performance by improving mineral nutrition. New Phytol 162:617631. Excel file containing Descriptions of Supplementary Tables (Data_description sheet) and Supplementary Tables 110 (in separate excel sheets). The host microbiome plays an important role in host immunity, at the interface between the host and the pathogen, and affects disease outcome. Together, these microbes and environmental factors contribute to shaping the soil microbiome, both spatially and temporally. Article PLoS Biol 9:e1001127. Austral Ecol 39:522531. Article Environ Microbiol 18:20392051. Appl Soil Ecol 111:114122. eCollection 2022. Microb Biotechnol. In: Paul EA (ed) Soil microbiology, ecology and biochemistry. The Lifelines Biobank initiative has been made possible by subsidies from the Dutch Ministry of Health, Welfare and Sport, the Dutch Ministry of Economic Affairs, the University Medical Center Groningen (UMCG the Netherlands), the University of Groningen and the Northern Provinces of the Netherlands. https://doi.org/10.1016/j.funeco.2014.01.005, Montes MF (2016) Nitrification. https://doi.org/10.1016/j.scienta.2015.08.043, Lucas RW, Casper BB, Jackson JK, Balser TC (2007) Soil microbial communities and extracellular enzyme activity in the New Jersey pinelands. J. Med. 2022 Springer Nature Switzerland AG. https://doi.org/10.5454/mi.9.4.3, Syller J (2014) Biological and molecular events associated with simultaneous transmission of plant viruses by invertebrate and fungal vectors. https://doi.org/10.1094/MPMI.2001.14.12.1351, Heeb S, Haas D (2007) Regulatory roles of the GacS/GacATwo-component system in plant-associated and other Gram-negative bacteria. https://doi.org/10.1111/j.1467-7652.2008.00331.x, Bass D, Richards TA (2011) Three reasons to re-evaluate fungal diversity on Earth and in the ocean. J Microbiol 51:439447. https://doi.org/10.1111/1574-6941.12306, Van Horn DJ, Van Horn ML, Barrett JE et al (2013) Factors controlling soil microbial biomass and bacterial diversity and community composition in a cold desert ecosystem: role of geographic scale. Development of land use regression models for PM2.5, PM2.5 absorbance, PM10 and PMcoarse in 20 European study areas; results of the ESCAPE project. https://doi.org/10.1111/j.1574-6941.2012.01298.x, Kembel SW, OConnor TK, Arnold HK et al (2014) Relationships between phyllosphere bacterial communities and plant functional traits in a neotropical forest. Appl Environ Microbiol 76:39363942. Annu Rev Phytopathol 42:211241. New Phytol 205:14061423. Wiley, New York, pp 167176. Andika IB, Kondo H, Sun L (2016) Interplays between soil-borne plant viruses and RNA silencing-mediated antiviral defense in roots. https://doi.org/10.1038/ismej.2012.116, Vystavna Y, Diadin D, Grynenko V et al (2017) Determination of dominant sources of nitrate contamination in transboundary (Russian Federation/Ukraine) catchment with heterogeneous land use. Fungal Biol Rev 25:159164. Methods 18, 618626 (2021). Role of environmental factors in shaping the soil microbiome Published in: Environmental Science & Pollution Research, August 2020 DOI: 10.1007/s11356-020-10471-2: Pubmed ID . Symbiosis 47:2333. https://doi.org/10.1146/annurev.micro.62.081307.162918, Lynch MDJ, Neufeld JD (2015) Ecology and exploration of the rare biosphere. For Policy Econ 84:6271. Plant Soil 321:279303. https://doi.org/10.1016/B978-0-12-415955-6.00005-0, Pavao-Zuckerman MA (2018) Soil ecology. FEMS Microbiol Ecol 86:2635. Challenges in benchmarking metagenomic profilers. https://doi.org/10.1111/nph.13312, Voriskova J, Baldrian P (2013) Fungal community on decomposing leaf litter undergoes rapid successional changes. Soil Biol Biochem 41:18661873. PMC Mycorrhiza 22:603613. https://doi.org/10.1111/ele.12381, Rdecker N, Pogoreutz C, Voolstra CR et al (2015) Nitrogen cycling in corals: the key to understanding holobiont functioning? Beelen, R. et al. Gastroenterology 145, 12621270.e1 (2013). PubMed https://doi.org/10.21775/9781910190333.10, Heeb S, Haas D (2001) Regulatory roles of the GacS/GacAtwo-component system in plant-associated and other Gram-negative bacteria. Soil microbiome is the paramount biotic factor responsible for nutrient cycling that in turn determines soil health and quality. Soil Biol Biochem 43:883894. https://doi.org/10.4067/S0718-95162015005000042, Lakshmanan V, Selvaraj G, Bais HP (2014) Functional soil microbiome: belowground solutions to an aboveground problem. Although several candidate gene studies have . https://doi.org/10.1111/1462-2920.13026. Terrestrial ecosystem . Evol. Front Plant Sci 4:165. https://doi.org/10.3389/fpls.2013.00165, Baldrian P (2003) Interactions of heavy metals with white-rot fungi. https://doi.org/10.1007/s00248-007-9346-7, Cha S, Chae HM, Lee SH, Shim JK (2017) Effect of elevated atmospheric CO2 concentration on growth and leaf litter decomposition of Quercus acutissima and Fraxinus rhynchophylla. https://doi.org/10.1038/ismej.2011.141, Angle JC, Morin TH, Solden LM et al (2017) Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions. Oh, M. & Zhang, L. DeepMicro: deep representation learning for disease prediction based on microbiome data. https://doi.org/10.1890/14-0772.1, Massalha H, Korenblum E, Malitsky S et al (2017) Live imaging of root-bacteria interactions in a microfluidics setup. New Phytol 162:617631. The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button. Environ Monit Assess 189:509. https://doi.org/10.1007/s10661-017-6227-5, Wakelin SA, Macdonald LM, OCallaghan M et al (2014) Soil functional resistance and stability are linked to different ecosystem properties. * phylum has significantly higher variance when compared to each of pathway classes (one-sided F test of variances FDRs<0.05, Supplementary Table 1G) d, Relative abundances of the top 10 MetaCyc pathways of all samples (sorted to match panel c). https://doi.org/10.1016/j.scitotenv.2018.05.016, Llad S, Lpez-Mondjar R, Baldrian P (2017) Forest soil bacteria: diversity, involvement in ecosystem processes, and response to global change. Vinke, P. C. et al. For Policy Econ 84:6271. Am Geophys Union, Fall Meet 2018, Abstr #B11C-2157, Xue S, Yang X, Liu G et al (2017) Effects of elevated CO2 and drought on the microbial biomass and enzymatic activities in the rhizospheres of two grass species in Chinese loess soil. https://doi.org/10.1016/j.psep.2017.01.021, Nunan N, Daniell TJ, Singh BK et al (2005) Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques. Int J Mol Sci 19:48. https://doi.org/10.1016/j.soilbio.2015.01.009, Liu Y, Zhang H, Xiong M et al (2017) Abundance and composition response of wheat field soil bacterial and fungal communities to elevated CO2 and increased air temperature. R.G., H.J.M.H. Soil Biol Biochem 75:1125. https://doi.org/10.1098/rspb.2014.1988, Ravishankara AR, Daniel JS, Portmann RW (2009) Nitrous oxide (N2O): the dominant ozone-depleting substance emitted in the 21st century. https://doi.org/10.2174/187220810790069523, Mendes R, Kruijt M, De Bruijn I et al (2011) Deciphering the rhizosphere microbiome for disease-suppressive bacteria. Academic, San Diego, pp 111149. Commun. https://doi.org/10.1016/j.apsoil.2007.01.004, Singh D, Shi L, Adams JM (2013) Bacterial diversity in the mountains of South-West China: climate dominates over soil parameters. https://doi.org/10.1111/mpp.12101, Tamada T, Kondo H (2013) Biological and genetic diversity of plasmodiophorid-transmitted viruses and their vectors. https://doi.org/10.1073/pnas.1711842115, Barriuso J, Ramos Solano B, Fray RG et al (2008) Transgenic tomato plants alter quorum sensing in plant growth-promoting rhizobacteria. Annu Rev Microbiol 67:437457. Article Epub 2017 Nov 15. PubMed Technol. Appl Environ Microbiol 84:e01694e01617. Academic, San Diego, pp 6976. Fungal Biol Rev 25:159164. Front Microbiol 9:1516. https://doi.org/10.3389/fmicb.2018.01516, Gehring CA, Mueller RC, Haskins KE et al (2014) Convergence in mycorrhizal fungal communities due to drought, plant competition, parasitism, and susceptibility to herbivory: consequences for fungi and host plants. This site needs JavaScript to work properly. https://doi.org/10.1111/nph.13288, Van Der Linde S, Suz LM, Orme CDL et al (2018) Environment and host as large-scale controls of ectomycorrhizal fungi. Vatanen, T. et al. 11, I19 (2010). Extended Data Fig. Role of environmental factors in shaping the soil microbiome. Bioresour Technol 97:12531258. https://doi.org/10.1073/pnas.1901307116, Kabil O, Vitvitsky V, Banerjee R (2014) Sulfur as a signaling nutrient through hydrogen sulfide. https://doi.org/10.1126/science.287.5460.2004, Sena HH, Sanches MA, Rocha DFS et al (2018) Production of biosurfactants by soil fungi isolated from the amazon forest. Proc Natl Acad Sci U S A 109:2139021395. nov., isolated from subtropical savannah soil. Science 359:320325. J. Veg. J Anim Plant Sci 27:19411957, CAS This study hypothesized that: H1, soil bacterial alpha- and beta-diversity would vary along natural salinity-sodicity gradients; H2, deterministic process would contribute to a greater extent in higher saline-sodic soils. Trends Microbiol 23:490497. Sci Rep 6:23680. https://doi.org/10.1038/srep23680, Castro HF, Classen AT, Austin EE et al (2010) Soil microbial community responses to multiple experimental climate change drivers. https://doi.org/10.1073/pnas.1509612113, Dupuy LX, Silk WK (2016) Mechanisms of early microbial establishment on growing root surfaces. Springer Nature, Singapore, pp 5174. https://doi.org/10.1007/s11103-015-0337-7, Perotto S, Angelini P, Bianciotto V et al (2013) Interactions of fungi with other organisms. 2 Overview of DMP microbiome composition and function. Academic, USA, pp 747750. and C.W. 4, 470479 (2019). https://doi.org/10.1016/B978-0-12-812766-7.00001-9, Uroz S, Ioannidis P, Lengelle J et al (2013) Functional assays and metagenomic analyses reveals differences between the microbial communities inhabiting the soil horizons of a Norway spruce plantation. https://doi.org/10.1146/annurev.earth.26.1.573, Koller R, Scheu S, Bonkowski M, Robin C (2013) Protozoa stimulate N uptake and growth of arbuscular mycorrhizal plants. Microb Ecol 65:593601. Gupta, V. K. et al. A predictive index for health status using species-level gut microbiome profiling. https://doi.org/10.1016/j.soilbio.2011.01.005, Martens-Habbena W, Berube PM, Urakawa H et al (2009) Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Res Microbiol 165:508516. https://doi.org/10.1038/nrmicro2990, Pakostova E, Johnson DB, Bao Z et al (2020) Bacterial and archaeal diversity in sulfide-bearing waste rock at faro mine complex, Yukon Territory, Canada. https://doi.org/10.1016/B978-0-444-63768-0.00850-7, Peay KG, Bruns TD (2014) Spore dispersal of basidiomycete fungi at the landscape scale is driven by stochastic and deterministic processes and generates variability in plant-fungal interactions. Annu Rev Genet 50:211234. Front Plant Sci 871:1493. https://doi.org/10.3389/fpls.2018.01493, Winder RS, Shamoun SF (2006) Forest pathogens: friend or foe to biodiversity? https://doi.org/10.3852/11-229, Snoeck D, Lacote R, Kli J et al (2013) Association of hevea with other tree crops can be more profitable than hevea monocrop during first 12 years. Eur. In: Penny SA (ed) The microbiology of the terrestrial deep subsurface. Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Appl Soil Ecol 111:114122. PubMed Central Science 355:358. https://doi.org/10.1126/science.aai7976, Norris LE, Collene AL, Asp ML et al (2009) Comparison of dietary conjugated linoleic acid with safflower oil on body composition in obese postmenopausal women with type 2 diabetes mellitus. FEMS Microbiol Ecol 72:179197. 2017 Oct;15(10):579-590. doi: 10.1038/nrmicro.2017.87. In: Holland HD, Turekian KK (eds) Treatise on geochemistry, 2nd edn. Biogeosciences 14:48794889. Science 333:12821285. Proc Natl Acad Sci U S A 114:42814283. 1a. https://doi.org/10.1016/j.pedobi.2015.04.002, Chu H, Neufeld JD, Walker VK, Grogan P (2011) The influence of vegetation type on the dominant soil bacteria, archaea, and fungi in a low arctic tundra landscape. 7 Microbiome associations with diseases and medication use. Front Microbiol 3. https://doi.org/10.3389/fmicb.2012.00348, Schimel D, Melillo J, Tian H et al (2000) Contribution of increasing CO2 and climate to carbon storage by ecosystems in the United States. Erlandson S, Wei X, Savage J, Cavender-Bares J, Peay K. Mol Ecol. https://doi.org/10.1007/s11104-008-9814-y, Hassani MA, Durn P, Hacquard S (2018) Microbial interactions within the plant holobiont. FEMS Microbiol Rev 37:634663. The roles of the outdoor environment and occupants in shaping the microbiome of the BE are evident, when Pasanen et al. Springer Nature, Switzerland, pp 363391. Elucidating Plant-Microbe-Environment Interactions Through Omics-Enabled Metabolic Modelling Using Synthetic Communities. https://doi.org/10.1155/2015/968582, Bonkowski M (2004) Protozoa and plant growth: the microbial loop in soil revisited. Plant Physiol Biochem 90:6474. 11, e1004557 (2015). volume27,pages 4122541247 (2020)Cite this article. Metagenomics library preparation and sequencing was done at Novogene. https://doi.org/10.1038/s41586-018-0189-9, Van Groenigen KJ, Osenberg CW, Hungate BA (2011) Increased soil emissions of potent greenhouse gases under increased atmospheric CO2. Front Microbiol 6:1559. https://doi.org/10.3389/fmicb.2015.01559, Bhattacharyya PN, Jha DK (2012) Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture. Front Microbiol. Front Microbiol 6:1559. https://doi.org/10.3389/fmicb.2015.01559, Bhattacharyya PN, Jha DK (2012) Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture. https://doi.org/10.1038/nrmicro.2016.89, Paul EA, Coleman DC, Wall DH (2015) Chapter 5 soil fauna: occurrence, biodiversity, and roles in ecosystem function. Appl Soil Ecol 36:147155. Plant Sci 8:1021. https://doi.org/10.3389/fpls.2017.01021, Rillig MC, Mummey DL (2006) Mycorrhizas and soil structure. Sun, Z. et al. https://doi.org/10.1146/annurev-arplant-050312-120106, Bulgarelli D, Garrido-Oter R, Mnch PC et al (2015) Structure and function of the bacterial root microbiota in wild and domesticated barley. https://doi.org/10.1016/j.jes.2014.06.012, ifkov L, Vtrovsk T, Howe A, Baldrian P (2016) Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter. 3, 816 (2018). and S.S. assisted in other statistical analyses, interpretation of data and drafting of the manuscript. Plant Soil 321:279303. https://doi.org/10.1016/S0038-0717(02)00157-8, Brader G, Compant S, Mitter B et al (2014) Metabolic potential of endophytic bacteria. Caster Academic Press, Norfolk, pp 179187, Norby RJ, De Kauwe MG, Walker AP et al (2017) Comment on Mycorrhizal association as a primary control of the CO2 fertilization effect. https://doi.org/10.1146/annurev.micro.55.1.485, Krome K, Rosenberg K, Bonkowski M, Scheu S (2009) Grazing of protozoa on rhizosphere bacteria alters growth and reproduction of Arabidopsis thaliana. https://doi.org/10.1016/j.chom.2015.01.011, Butterly CR, Phillips LA, Wiltshire JL et al (2016)Long-term effects of elevated CO2 on carbon and nitrogen functional capacity of microbial communities in three contrasting soils. The fatty liver index: a simple and accurate predictor of hepatic steatosis in the general population. Bar heights represent the number of associations relative to the maximal number of associations for the phenotype group. https://doi.org/10.1038/ismej.2017.90, Hartmann A, Schmid M, van Tuinen D, Berg G (2009)Plant-driven selection of microbes. https://doi.org/10.1111/nph.12536, Koch PL (1998) Isotopic reconstruction of past continental environments. Tree Physiol 30:11481160. https://doi.org/10.1126/science.aap9516, Delmont TO, Robe P, Cecillon S et al (2011) Accessing the soil metagenome for studies of microbial diversity. Wang, P. et al. https://doi.org/10.1128/AEM.01694-17, Zak DR, Pregitzer KS, Curtis PS, Holmes WE (2000) Atmospheric CO2 and the composition and function of soil microbial communities. Google Scholar, Angel R, Claus P, Conrad R (2012) Methanogenic archaea are globally ubiquitous in aerated soils and become active under wet anoxic conditions. MetaPhlAn2 for enhanced metagenomic taxonomic profiling. Study-wide significant associations (Benjamini-Hochberg corrected p-value<0.05) are marked with +/. The soil microbiome comprises one of the most important and complex components of all terrestrial ecosystems as it harbors millions of microbes including bacteria, fungi, archaea, viruses, and protozoa. Finally, we examined the role of several abiotic factors involved in the shaping of the soil microbiome. https://doi.org/10.1111/1574-6941.12078, Samarakoon M, Hyde K, Promputtha I et al (2016) Evolution of Xylariomycetidae (Ascomycota: Sordariomycetes) Samarakoon. https://doi.org/10.1007/s11356-020-10471-2, https://doi.org/10.1007/978-1-4419-7931-5_14, https://doi.org/10.1016/B978-0-08-095975-7.00501-5, https://doi.org/10.1038/s41467-017-01753-4, https://doi.org/10.1016/j.plaphy.2015.03.004, https://doi.org/10.1007/s00300-003-0515-y, https://doi.org/10.1007/s00248-010-9727-1, https://doi.org/10.1111/j.1469-8137.2011.03927.x, https://doi.org/10.1016/S0141-0229(02)00245-4, https://doi.org/10.1016/j.soilbio.2015.12.004, https://doi.org/10.1111/j.1467-7652.2008.00331.x, https://doi.org/10.1016/j.fbr.2011.10.003, https://doi.org/10.1016/j.soilbio.2017.06.012, https://doi.org/10.1007/s00248-009-9583-z, https://doi.org/10.1111/j.1462-2920.2011.02480.x, https://doi.org/10.1016/j.tree.2016.02.016, https://doi.org/10.1016/j.tplants.2012.04.001, https://doi.org/10.1007/s10531-011-0220-z, https://doi.org/10.1007/s11274-011-0979-9, https://doi.org/10.1111/j.1469-8137.2004.01066.x, https://doi.org/10.1016/S0038-0717(02)00157-8, https://doi.org/10.1016/j.copbio.2013.09.012, https://doi.org/10.1146/annurev-phyto-082712-102346, https://doi.org/10.1007/978-981-10-4511-0_4, https://doi.org/10.1146/annurev-arplant-050312-120106, https://doi.org/10.1016/j.chom.2015.01.011, https://doi.org/10.1016/j.soilbio.2016.03.010, https://doi.org/10.1007/s00248-007-9346-7, https://doi.org/10.1371/journal.pone.0171197, https://doi.org/10.1016/j.marpolbul.2008.03.015, https://doi.org/10.1016/j.pedobi.2015.04.002, https://doi.org/10.1016/B978-0-12-384719-5.00403-2, https://doi.org/10.1111/j.1461-0248.2007.01053.x, https://doi.org/10.1371/journal.pone.0067884, https://doi.org/10.1038/s42003-018-0129-0, https://doi.org/10.1007/s00248-012-0132-9, https://doi.org/10.1016/S0038-0717(99)00141-8, https://doi.org/10.1016/j.soilbio.2020.107704, https://doi.org/10.1016/j.apsoil.2016.12.003, https://doi.org/10.1016/j.resmic.2014.06.001, https://doi.org/10.1016/j.cub.2016.05.057, https://doi.org/10.1016/j.apsoil.2007.02.005, https://doi.org/10.1016/j.funeco.2014.06.004, https://doi.org/10.1007/s10530-004-4720-6, https://doi.org/10.1016/S0169-5347(02)02496-5, https://doi.org/10.1007/s11104-008-9839-2, https://doi.org/10.1016/S0167-8809(99)00032-8, https://doi.org/10.1016/B978-0-12-386454-3.00895-2, https://doi.org/10.1128/microbiolspec.funk-0047-2016, https://doi.org/10.1371/journal.pone.0167405, https://doi.org/10.1007/s11104-008-9814-y, https://doi.org/10.1186/s40168-018-0445-0, https://doi.org/10.1017/S0953756201004725, https://doi.org/10.21775/9781910190333.10, https://doi.org/10.1094/MPMI.2001.14.12.1351, https://doi.org/10.1094/mpmi.2001.14.12.1351, https://doi.org/10.1016/B978-012470100-7/50005-4, https://doi.org/10.1007/s00572-012-0437-z, https://doi.org/10.1007/s11270-015-2308-7, https://doi.org/10.15666/aeer/1504_18831899, https://doi.org/10.1016/B978-0-12-394807-6.00124-6, https://doi.org/10.1016/j.biombioe.2017.09.005, https://doi.org/10.1038/s41579-019-0265-7, https://doi.org/10.13140/RG.2.1.5171.2164, https://doi.org/10.1046/j.1469-8137.2003.00938.x, https://doi.org/10.1146/annurev-nutr-071813-105654, https://doi.org/10.1007/s13199-010-0085-z, https://doi.org/10.1111/j.1574-6941.2012.01298.x, https://doi.org/10.1146/annurev.earth.26.1.573, https://doi.org/10.1016/j.soilbio.2013.05.020, https://doi.org/10.1146/annurev.micro.55.1.485, https://doi.org/10.1016/j.soilbio.2009.06.008, https://doi.org/10.1007/s00572-016-0688-1, https://doi.org/10.1016/j.virusres.2008.05.019, https://doi.org/10.1186/s40168-016-0174-1, https://doi.org/10.4067/S0718-95162015005000042, https://doi.org/10.1007/s11103-015-0417-8, https://doi.org/10.1016/S1093-0191(02)00118-1, https://doi.org/10.1016/j.apsoil.2017.04.004, https://doi.org/10.1016/j.soilbio.2014.03.021, https://doi.org/10.1128/AEM.71.12.8573-8580.2005, https://doi.org/10.1016/j.soilbio.2015.01.009, https://doi.org/10.1007/s00374-016-1159-8, https://doi.org/10.1016/j.scitotenv.2018.05.016, https://doi.org/10.1016/j.scienta.2015.08.043, https://doi.org/10.1016/j.soilbio.2007.05.008, https://doi.org/10.1146/annurev.micro.62.081307.162918, https://doi.org/10.1016/j.soilbio.2011.01.005, https://doi.org/10.2174/187220810790069523, https://doi.org/10.1016/j.geoderma.2017.12.026, https://doi.org/10.1016/j.funeco.2014.01.005, https://doi.org/10.1371/journal.pbio.1001127, https://doi.org/10.1146/annurev-genet-120215-034952, https://doi.org/10.1016/j.psep.2017.01.021, https://doi.org/10.1128/AEM.71.11.6784-6792.2005, https://doi.org/10.1146/annurev-micro-092412-155614, https://doi.org/10.1080/01490451.2020.1731020, https://doi.org/10.1016/j.biortech.2005.01.043, https://doi.org/10.1016/j.apsoil.2019.08.006, https://doi.org/10.1016/B978-0-12-415955-6.00005-0, https://doi.org/10.1016/B978-0-444-63768-0.00850-7, https://doi.org/10.1111/j.1365-294X.2012.05666.x, https://doi.org/10.1007/s00572-015-0671-2, https://doi.org/10.1007/s11103-015-0337-7, https://doi.org/10.1080/11263504.2012.753136, https://doi.org/10.1002/9781119053095.ch16, https://doi.org/10.1016/j.forpol.2017.01.012, https://doi.org/10.1007/s10531-012-0250-1, https://doi.org/10.1016/j.tim.2015.03.008, https://doi.org/10.1016/bs.aecr.2018.07.001, https://doi.org/10.1111/j.1469-8137.2006.01750.x, https://doi.org/10.1146/annurev.phyto.42.040803.140317, https://doi.org/10.4467/16890027AP.12.018.0764, https://doi.org/10.1016/B978-0-12-417163-3.00011-1, https://doi.org/10.1016/j.micres.2015.11.008, https://doi.org/10.5424/sjar/2017151-9990, https://doi.org/10.1126/science.287.5460.2004, https://doi.org/10.1007/978-1-4020-8770-7_1, https://doi.org/10.1007/s00248-016-0748-2, https://doi.org/10.1016/j.fbr.2012.01.001, https://doi.org/10.1016/j.apsoil.2007.01.004, https://doi.org/10.1007/s12275-013-2446-9, https://doi.org/10.1016/B978-0-12-370526-6.X5001-6, https://doi.org/10.1016/j.indcrop.2012.07.053, https://doi.org/10.1016/j.apsoil.2019.103490, https://doi.org/10.1007/s10327-013-0457-3, https://doi.org/10.1016/j.soilbio.2019.04.020, https://doi.org/10.1007/s11104-014-2260-0, https://doi.org/10.2136/sssabookser5.3.c16, https://doi.org/10.1016/B978-0-12-812766-7.00001-9, https://doi.org/10.1371/journal.pone.0055929, https://doi.org/10.1016/S0065-2164(01)48000-2, https://doi.org/10.1038/s41586-018-0189-9, https://doi.org/10.1371/journal.pone.0066103, https://doi.org/10.1007/s10661-017-6227-5, https://doi.org/10.2136/sssaj2015.11.0407, https://doi.org/10.1111/j.1365-2699.2010.02423.x, https://doi.org/10.1007/s00248-014-0465-7, https://doi.org/10.1590/18069657rbcs20160460, https://doi.org/10.1146/annurev.cellbio.21.012704.131001, https://doi.org/10.1111/j.1574-6941.2010.00848.x, https://doi.org/10.1016/j.envpol.2010.06.004, https://doi.org/10.2136/sssaj1997.03615995006100020015x, https://doi.org/10.1016/j.cois.2015.01.009, https://doi.org/10.1080/07060660609507378, https://doi.org/10.1016/j.baae.2009.12.001, https://doi.org/10.1111/j.1574-6968.2008.01445.x, https://doi.org/10.1016/j.geoderma.2016.10.025, https://doi.org/10.1007/s11104-012-1485-z, https://doi.org/10.1007/s00442-015-3313-7, https://doi.org/10.1007/978-1-62703-239-1_1, https://doi.org/10.1016/j.jes.2014.06.012.

Grand Cevahir Hotel Convention Center, Pronunciation Of Mochaccino, Ivory Coast National Football Team World Cup, Delete Object Versions S3, Factors That Influence Leadership Styles In Education, Strapi Missing Required Key 'bucket' In Params, The Crucible Penguin Classics Pdf, Royal Bank Holiday 2022, Psychology Of Attracting A Woman, Biological Classification Notes For Neet,

role of environmental factors in shaping the soil microbiomeAuthor:

role of environmental factors in shaping the soil microbiome

role of environmental factors in shaping the soil microbiome

role of environmental factors in shaping the soil microbiome

role of environmental factors in shaping the soil microbiome

role of environmental factors in shaping the soil microbiome